This dataset includes data recorded by the Heihe integrated observatory network obtained from the automatic weather station (AWS) at the observation system of Meteorological elements gradient of Yakou station from January 1 to December 31, 2018. The site (100.2421°E, 38.0142°N) was located on an alpine meadow surface, which is near west of Qilian county, Qinghai Province. The elevation is 4148 m. The installation heights and orientations of different sensors and measured quantities were as follows: air temperature and humidity profile (HMP45C; 5 m, north), wind speed and direction profile (010C/020C; 10 m, north), air pressure (PTB110; in the tamper box on the ground), rain gauge (TE525M; 10 m), four-component radiometer (CNR1; 6 m, south), two infrared temperature sensors (SI-111; 6 m, south, vertically downward), soil heat flux (HFP01; 3 duplicates, -0.06 m), soil temperature profile (109ss-L; 0, -0.04, -0.1, -0.2, -0.4, -0.8, -1.2, and -1.6 m), and soil moisture profile (CS616; -0.04, -0.1, -0.2, -0.4, -0.8, -1.2, and -1.6 m). The observations included the following: air temperature and humidity (Ta_5 m; RH_5 m) (℃ and %, respectively), wind speed (Ws_10 m) (m/s), wind direction (WD_10 m) (°), air pressure (press) (hpa), precipitation (rain) (mm), four-component radiation (DR, incoming shortwave radiation; UR, outgoing shortwave radiation; DLR_Cor, incoming longwave radiation; ULR_Cor, outgoing longwave radiation; Rn, net radiation) (W/m^2), infrared temperature (IRT_1 and IRT_2) (℃), soil heat flux (Gs_1, Gs_2 and Gs_3) (W/m^2), soil temperature (Ts_0 cm, Ts_4 cm, Ts_10 cm, Ts_20 cm, Ts_40 cm, Ts_80 cm, Ts_120 cm, and Ts_160 cm) (℃), and soil moisture (Ms_4 cm, Ms_10 cm, Ms_20 cm, Ms_40 cm, Ms_80 cm, Ms_120 cm, and Ms_160 cm) (%, volumetric water content). The data processing and quality control steps were as follows: (1) The AWS data were averaged over intervals of 10 min for a total of 144 records per day. The missing data were denoted by -6999. Due to the sensor malfunction, the infrared temperature and wind direction were wrong during October 10 to November 17 and after August, respectively. (2) Data in duplicate records were rejected. (3) Unphysical data were rejected. (4) The data marked in red are problematic data. (5) The format of the date and time was unified, and the date and time were collected in the same column, for example, date and time: 2018-9-10 10:30. (6) Finally, the naming convention was AWS+ site no. Moreover, suspicious data were marked in red. For more information, please refer to Liu et al. (2018) (for sites information), Liu et al. (2011) for data processing) in the Citation section.

This dataset includes data recorded by the Heihe integrated observatory network obtained from the automatic weather station (AWS) at the observation system of Zhangye wetland station from January 1 to December 31, 2018. The site (100.4464° E, 38.9751° N) was located on a wetland (reed surface) in Zhangye National Wetland Park, Gansu Province. The elevation is 1460 m. The installation heights and orientations of different sensors and measured quantities were as follows: air temperature and humidity profile (HMP45AC; 5 and 10 m, north), wind speed profile (03002; 5 and 10 m, north), wind direction profile (03002; 10 m, north), air pressure (CS100; 2 m), rain gauge (TE525M; 10 m), four-component radiometer (CNR1; 6 m, south), two infrared temperature sensors (SI-111; 6 m, south, vertically downward), soil heat flux (HFP01; 3 duplicates, -0.06 m), soil temperature profile (109ss-L; 0, -0.02, -0.04, -0.1, -0.2 and -0.4 m), and four photosynthetically active radiation (PQS-1; two above the plants, 6 m, south, one vertically downward and one vertically upward; two below the plants, 0.25 m, south, one vertically downward and one vertically upward). The observations included the following: air temperature and humidity (Ta_5 m and Ta_10 m; RH_5 m and RH_10 m) (℃ and %, respectively), wind speed (Ws_5 m and Ws_10 m) (m/s), wind direction (WD_10 m) (°), air pressure (press) (hpa), precipitation (rain) (mm), four-component radiation (DR, incoming shortwave radiation; UR, outgoing shortwave radiation; DLR_Cor, incoming longwave radiation; ULR_Cor, outgoing longwave radiation; Rn, net radiation) (W/m^2), infrared temperature (IRT_1 and IRT_2) (℃), soil heat flux (Gs_1, Gs_2, and Gs_3) (W/m^2), soil temperature (Ts_0 cm, Ts_2 cm, Ts_4 cm, Ts_10 cm, Ts_20 cm and Ts_40 cm) (℃), on the plants photosynthetically active radiation of upward and downward (PAR_U_up and PAR_U_down) (μmol/ (s m^-2)), and below the plants photosynthetically active radiation of upward and downward (PAR_D_up and PAR_D_down) (μmol/ (s m^-2)). The data processing and quality control steps were as follows: (1) The AWS data were averaged over intervals of 10 min for a total of 144 records per day. The missing data were denoted by -6999. (2) Data in duplicate records were rejected. (3) Unphysical data were rejected. (4) The data marked in red are problematic data. (5) The format of the date and time was unified, and the date and time were collected in the same column, for example, date and time: 2018-6-10 10:30. (6) Finally, the naming convention was AWS+ site no. Moreover, suspicious data were marked in red. For more information, please refer to Liu et al. (2018) (for sites information), Liu et al. (2011) for data processing) in the Citation section.

This dataset contains the flux measurements from the large aperture scintillometer (LAS) at Arou Superstation in the Heihe integrated observatory network from January 1 to December 31 in 2018. There were two types of LASs at Arou Superstation: BLS450 and zzlas, produced by Germany and China, respectively. The north tower was set up with the zzlas receiver and the BLS450 transmitter, and the south tower was equipped with the zzlas transmitter and the BLS450 receiver. The site (north: 100.471° E, 38.057° N; south: 100.457° E, 38.038° N) was located in Caodaban village of A’rou town in Qilian county, Qinghai Province. The underlying surface between the two towers was alpine meadow. The elevation is 3033 m. The effective height of the LASs was 9.5 m, and the path length was 2390 m. The data were sampled 1 minute at both BLS450 and zzlas. The raw data acquired at 1 min intervals were processed and quality controlled. The data were subsequently averaged over 30 min periods, in which sensible heat flux was iteratively calculated by combining Cn2 with meteorological data according to the Monin-Obukhov similarity theory. The main quality control steps were as follows: (1) The data were rejected when Cn2 exceeded the saturated criterion (BLS450: Cn2>7.25E-14, zzlas: Cn2>7.84E-14). (2) The data were rejected when the demodulation signal was small (BLS450: Mininum X Intensity<50; zzlas: Demod>-20mv). (3) The data were rejected when collected during precipitation. (4) The data were rejected if collected at night when weak turbulence occurred (u* was less than 0.1 m/s). In the iteration process, the universal functions of Thiermann and Grassl, 1992 and Andreas, 1988 were selected for BLS450 and zzlas, respectively. Detailed can refer to Liu et al. (2011, 2013). Several instructions were included with the released data. (1) The data were primarily obtained from BLS450 measurements, and missing flux measurements from the BLS450 instrument were substituted with measurements from the zzlas instrument. The missing data were denoted by -6999. Due to the problems of storing and wireless transmission, data from 5 July to 24 August, were not collected. (2) The dataset contained the following variables: Date/time (yyyy/m/d h:mm), the structural parameter of the air refractive index (Cn2, m-2/3), and the sensible heat flux (H_LAS, W/m^2). In this dataset, a time of 0:30 corresponds to the average data for the period between 0:00 and 0:30, and the data were stored in *.xlsx format. Moreover, suspicious data were marked in red. For more information, please refer to Liu et al. (2018) (for sites information), Liu et al. (2011) (for data processing) in the Citation section.

This dataset contains the flux measurements from the large aperture scintillometer (LAS) at Daman Superstation in the Heihe integrated observatory network from January 1 to December 31 in 2018. There were two types of LASs at Daman Superstation: BLS450 and BLS900, produced by Germany. The north tower was set up with the BLS450 receiver and the BLS900 transmitter, and the south tower was equipped with the BLS450 transmitter and the BLS900 receiver. The site (north: 100.379° E, 38.861° N; south: 100.369° E, 38.847° N) was located in Daman irrigation district, which is near Zhangye, Gansu Province. The underlying surfaces between the two towers were corn, orchard, and greenhouse. The elevation is 1556 m. The effective height of the LASs was 22.45 m, and the path length was 1854 m. The data were sampled 1 minute at both BLS450 and BLS900. The raw data acquired at 1 min intervals were processed and quality controlled. The data were subsequently averaged over 30 min periods, in which sensible heat flux was iteratively calculated by combining Cn2 with meteorological data according to the Monin-Obukhov similarity theory. The main quality control steps were as follows: (1) The data were rejected when Cn2 exceeded the saturated criterion (Cn2>1.43E-13). (2) The data were rejected when the demodulation signal was small (Average X Intensity<1000). (3) The data were rejected when collected during precipitation. (4) The data were rejected if collected at night when weak turbulence occurred (u* was less than 0.1 m/s). In the iteration process, the universal functions of Thiermann and Grassl, 1992 was selected. Detailed can refer to Liu et al. (2011, 2013). Several instructions were included with the released data. (1) The data were primarily obtained from BLS900 measurements, and missing flux measurements from the BLS900 instrument were substituted with measurements from the BLS450 instrument. The missing data were denoted by -6999. (2) The dataset contained the following variables: Date/time (yyyy/m/d h:mm), the structural parameter of the air refractive index (Cn2, m-2/3), and the sensible heat flux (H_LAS, W/m^2). In this dataset, a time of 0:30 corresponds to the average data for the period between 0:00 and 0:30, and the data were stored in *.xlsx format. Moreover, suspicious data were marked in red. For more information, please refer to Liu et al. (2018) (for sites information), Liu et al. (2011) (for data processing) in the Citation section.

This dataset contains the flux measurements from the large aperture scintillometer (LAS) at Sidaoqiao Superstation in the Heihe integrated observatory network from January 1 to December 31 in 2018. There were one German BLS900 at Sidaoqiao Superstation. The north tower was set up with the BLS900 receiver and the south tower was equipped with the BLS900 transmitter. The site (north: 101.137° E, 42.008° N; south: 101.131° E, 41.987 N) was located in Ejinaqi, Inner Mongolia. The underlying surfaces between the two towers were tamarisk, populus, bare land and farmland. The elevation is 873 m. The effective height of the LAS was 25.5 m, and the path length was 2350 m. The data were sampled 1 minute. The raw data acquired at 1 min intervals were processed and quality controlled. The data were subsequently averaged over 30 min periods, in which sensible heat flux was iteratively calculated by combining Cn2 with meteorological data according to the Monin-Obukhov similarity theory. The main quality control steps were as follows: (1) The data were rejected when Cn2 exceeded the saturated criterion (Cn2>7.58E-14). (2) The data were rejected when the demodulation signal was small (Average X Intensity<1000). (3) The data were rejected when collected during precipitation. (4) The data were rejected if collected at night when weak turbulence occurred (u* was less than 0.1 m/s). In the iteration process, the universal functions of Thiermann and Grassl, 1992 was selected. Detailed can refer to Liu et al. (2011, 2013). Several instructions were included with the released data. (1) The missing data from the BLS900 instrument were denoted by -6999. (2) The dataset contained the following variables: Date/time (yyyy/m/d h:mm), the structural parameter of the air refractive index (Cn2, m-2/3), and the sensible heat flux (H_LAS, W/m^2). In this dataset, a time of 0:30 corresponds to the average data for the period between 0:00 and 0:30, and the data were stored in *.xlsx format. Moreover, suspicious data were marked in red. For more information, please refer to Liu et al. (2018) (for sites information), Liu et al. (2011) (for data processing) in the Citation section.

This dataset includes data recorded by the Heihe integrated observatory network obtained from a Cosmic-ray Soil Moisture Observing System for soil moisture observation at the Daman Superstation from January 1 to December 31, 2018. The site (100.372° E, 38.856° N) was located on a cropland (maize surface) in the Daman irrigation area, which is near Zhangye city, Gansu Province. The elevation is 1556 m. The bottom of the probe was 0.5 m above the ground; the sampling interval was 1 hour. The raw COSMOS data include the following variables: battery (Batt, V), temperature (T, C), relative humidity (RH, %), air pressure (P, hPa), fast neutron counts (N1C, counts per hour), thermal neutron counts (N2C, counts per hour), sample time of fast neutrons (N1ET, s), and sample time of thermal neutrons (N2ET, s). The distributed data include the following variables: Date, Time, P, N1C, N1C_cor (corrected fast neutron counts) and VWC (volume soil moisture, %), which were processed as follows: 1) Data were removed and replaced by -6999 when (a) the battery voltage was less than 11.8 V, (b) the relative humidity was greater than 80% inside the probe box, (c) the counting data were not of one-hour duration and (d) neutron count differed from the previous value by more than 20%; 2) An air pressure correction was applied to the quality-controlled raw data according to the equation contained in the equipment manual; 3) After the quality control and corrections were applied, soil moisture was calculated using the equation in Zreda et al. (2012), where N0 is the neutron counts above dry soil and the other variables are fitted constants that define the shape of the calibration function. Here, the parameter N0 was calibrated using the in situ observed soil moisture by SoilNET within the footprint; 4) Based on the calibrated N0 and corrected N1C, the hourly soil moisture was computed using the equation from the equipment manual. Moreover, suspicious data were marked in red. For more information, please refer to Liu et al. (2018) (for sites information), Zhu et al. (2015) for data processing) in the Citation section.

This dataset contains the LAI measurements from the Daman superstation in the middle reaches of the Heihe integrated observatory network from June 11 to September 18 in 2018. The site (100.372° E, 38.856°N) was located in the maize surface, near Zhangye city in Gansu Province. The elevation is 1556 m. There are 3 observation samples, each of which is about 30m×30m in size, and the latitude and longitude ranges are (100.373297°E~100.374205°E, 38.857871°N~38.858390°N), (100.373918°E~100.373897°E, 38.854025°). N~38.854941°N), (100.368007°E~100.369044°E, 38.850678°N~38.851580°N). Five sub-canopy nodes and one above-canopy node are arranged in each sample. The LAI data is obtained from LAINet measurements following four steps: (1) the raw data is light quantum (level 0); (2) the daily LAI can be obtained using the software LAInet (level 1); (3) the invalid and null values are screened and using the 7 days moving averaged method to obtain the processed LAI (level 2); (4) for the multi LAINet nodes observation, the averaged LAI of the nodes area is the final LAI (level 3). The released data are the post processed LAI products and stored using *.xls format. For more information, please refer to Liu et al. (2018) (for sites information), Qu et al. (2014) for data processing) in the Citation section.

This dataset contains the LAI measurements from the Sidaoqiao in the downstream of the Heihe integrated observatory network from June 16 to October 18 in 2018. The site was located in Ejina Banner in Inner Mongolia Autonomous Region. The elevation is 870 m. There are 2 observation samples, around Sidaoqiao superstation (101.1374E, 42.0012N) and Mixed forest station (101.1335E, 41.9903N), each of which is about 30m×30m in size. Five sub-canopy nodes and one above-canopy node are arranged in each sample. The LAI data is obtained from LAINet measurements following four steps: (1) the raw data is light quantum (level 0); (2) the daily LAI can be obtained using the software LAInet (level 1); (3) the invalid and null values are screened and using the 7 days moving averaged method to obtain the processed LAI (level 2); (4) for the multi LAINet nodes observation, the averaged LAI of the nodes area is the final LAI (level 3). The released data are the post processed LAI products and stored using *.xls format. For more information, please refer to Liu et al. (2018) (for sites information), Qu et al. (2014) for data processing) in the Citation section.

The dataset contains phenological camera observation data collected at the Arou Superstation in the midstream of the Heihe integrated observatory network from June 13 to November 16, 2018. The instrument was developed with data processed by Beijing Normal University. The phenomenon camera integrates data acquisition and data transmission functions. The camera captures high-quality data with a resolution of 1280×720 by looking-downward. The calculation of the greenness index and phenology are following 3 steps: (1) calculate the relative greenness index (GCC, Green Chromatic Coordinate, calculated by GCC=G/(R+G+B)) according to the region of interest, (2) perform gap-filling for the invalid values, filtering and smoothing, and (3) determine the key phenological parameters according to the growth curve fitting (such as the growth season start date, Peak, growth season end, etc.) There are also 3 steps for coverage data processing: (1) select images with less intense illumination, (2) divide the image into vegetation and soil, and (3) calculate the proportion of vegetation pixels in each image in the calculation area. After the time series data is extracted, the original coverage data is smoothed and filtered according to the time window specified by the user, and the filtered result is the final time series coverage. This data set includes relative greenness index (Gcc). Please refer to Liu et al. (2018) for sites information in the Citation section.

The dataset contains phenological camera observation data collected at the Arou Superstation in the midstream of the Heihe integrated observatory network from June 13 to November 16, 2018. The instrument was developed with data processed by Beijing Normal University. The phenomenon camera integrates data acquisition and data transmission functions. The camera captures high-quality data with a resolution of 1280×720 by looking-downward. The calculation of the greenness index and phenology are following 3 steps: (1) calculate the relative greenness index (GCC, Green Chromatic Coordinate, calculated by GCC=G/(R+G+B)) according to the region of interest, (2) perform gap-filling for the invalid values, filtering and smoothing, and (3) determine the key phenological parameters according to the growth curve fitting (such as the growth season start date, Peak, growth season end, etc.) There are also 3 steps for coverage data processing: (1) select images with less intense illumination, (2) divide the image into vegetation and soil, and (3) calculate the proportion of vegetation pixels in each image in the calculation area. After the time series data is extracted, the original coverage data is smoothed and filtered according to the time window specified by the user, and the filtered result is the final time series coverage. This data set includes relative greenness index (GCC), phenological phase and fractional cover (FC). Please refer to Liu et al. (2018) for sites information in the Citation section.

The dataset contains phenological camera observation data collected at the Arou Superstation in the midstream of the Heihe integrated observatory network from June 13 to November 16, 2018. The instrument was developed with data processed by Beijing Normal University. The phenomenon camera integrates data acquisition and data transmission functions. The camera captures high-quality data with a resolution of 1280×720 by looking-downward. The calculation of the greenness index and phenology are following 3 steps: (1) calculate the relative greenness index (GCC, Green Chromatic Coordinate, calculated by GCC=G/(R+G+B)) according to the region of interest, (2) perform gap-filling for the invalid values, filtering and smoothing, and (3) determine the key phenological parameters according to the growth curve fitting (such as the growth season start date, Peak, growth season end, etc.) There are also 3 steps for coverage data processing: (1) select images with less intense illumination, (2) divide the image into vegetation and soil, and (3) calculate the proportion of vegetation pixels in each image in the calculation area. After the time series data is extracted, the original coverage data is smoothed and filtered according to the time window specified by the user, and the filtered result is the final time series coverage. This data set includes relative greenness index (Gcc). Please refer to Liu et al. (2018) for sites information in the Citation section.

The dataset contains phenological camera observation data collected at the Arou Superstation in the midstream of the Heihe integrated observatory network from June 13 to November 16, 2018. The instrument was developed with data processed by Beijing Normal University. The phenomenon camera integrates data acquisition and data transmission functions. The camera captures high-quality data with a resolution of 1280×720 by looking-downward. The calculation of the greenness index and phenology are following 3 steps: (1) calculate the relative greenness index (GCC, Green Chromatic Coordinate, calculated by GCC=G/(R+G+B)) according to the region of interest, (2) perform gap-filling for the invalid values, filtering and smoothing, and (3) determine the key phenological parameters according to the growth curve fitting (such as the growth season start date, Peak, growth season end, etc.) There are also 3 steps for coverage data processing: (1) select images with less intense illumination, (2) divide the image into vegetation and soil, and (3) calculate the proportion of vegetation pixels in each image in the calculation area. After the time series data is extracted, the original coverage data is smoothed and filtered according to the time window specified by the user, and the filtered result is the final time series coverage. This data set includes relative greenness index (Gcc). Please refer to Liu et al. (2018) for sites information in the Citation section.