This data set is collected according to the output results of tesim ecological process model, including biomass, plant N and P content, evapotranspiration, NPP and other model output results. Some of the results are obtained by field measurement, some by laboratory analysis of field samples, some by literature.
PENG Hongchun
This data is based on the observation of corn in the middle reaches of heihe river irrigated area. The observation instrument is licor-6400 XTR and the site is selected near the HiWATER combined test superstation.The photosynthesis parameters of maize were observed through uncontrolled experiments and controlled experiments (controlling carbon dioxide and light intensity) from June 22, 2012 to August 24, 2012.
LI Yanhui, PENG Hongchun, YANG Bao
Leaf water potential is an important indicator of plant growth. In this project, Populus euphratica and Tamarix were selected in the lower reaches of Heihe River. Wp4c was used for 15 days to measure leaf water potential data before dawn, noon and sunset, which can provide basic data for understanding the growth conditions of desert plants.
SI Jianhua
The accurate estimation of sapwood area and heartwood area is the main means to convert the transpiration water consumption scale. In October 2011, this project investigated the sapwood and heartwood of 98 Populus euphratica in Ejin Oasis and measured the width of sapwood and heartwood. The relation curve of sapwood area with DBH and height was established. Please refer to LI Wei, SI Jianhua,FENG Qi, YU Teng fei. Response of Transpiration to Water Vapour Pressure Defferential of Populus euphratica. Journal of Desert Research, 2013, 33(5): 1377-1384. for details.
SI Jianhua
The sampling and distribution of plant materials in the arid regions of the middle and lower reaches of Heihe River Basin. The plants are mainly shrubs and a few herbs. The numbering of plant materials is consistent with the morphological structural characteristics analysis table and is used in correspondence with each other.
LIU Yubing
The survey area is 101 ° 3 ′ 13.265 ″ longitude, 42 ° 1 ′ 53.660 ″ latitude and 883.54m altitude. The sample area is 100 × 100m, and the sample area is 20 × 20m. The crown width, height and DBH of Populus euphratica were investigated.
SI Jianhua
Trunk sap flow is an effective tool for measuring transpiration of a single plant. In this project, the trunk sap flow data of Populus euphratica in the lower reaches of Heihe River was measured by HRM (ICT, Australia) with a frequency of 0.5h. In the growth season of 2012-2013, the installation location is the north and lateral roots (50cm underground depth, 30cm away from the trunk) at the DBH (1.3m).
SI Jianhua
Lysimeter is the most effective tool for measuring water consumption per plant, which can provide daily, monthly and seasonal changes of transpiration water consumption per plant. In this project, a lysimeter measurement system for Populus euphratica seedlings is established in the lower reaches of Heihe River, with the observation frequency of 0.5h, mainly including water content changes, infiltration, evapotranspiration, etc.
SI Jianhua
The dataset of ground truth measurement synchronizing with PROBA CHRIS was obtained in the Yingke oasis and Huazhaizi desert steppe foci experimental areas on Jun. 22, 2008. Observation items included: (1) Albedo by the shortwave radiometer in Huazhaizi desert No. 2 plot. R =10H (R for FOV radius; H for the probe height). Data were archived in Excel format. (2) BRDF of maize in Yingke oasis maize field by ASD (350-2 500 nm) from Beijing University and the observation platform of BNU make. The maximum height of the platform was 5m above the ground with the azimuth 0~360° and the zenith angle -60°~60°; BRDF in Huazhaizi desert No. 2 plot by ASD from Institute of Remote Sensing Applications (CAS) and the observation platform of its own make, whose maximum height was 2m above the ground with the zenith angle -70°~70°. Raw data were binary files direct from ASD (by ViewSpecPro), and pre-processed data on reflectance were in Excel format. (3) Atmospheric parameters in Huazhaizi desert No. 2 plot by CE318 (produced by CIMEL in France). The total optical depth, aerosol optical depth, Rayleigh scattering coefficient, column water vapor in 936 nm, particle size spectrum and phase function were then retrieved from these observations. The optical depth in 1020nm, 936nm, 870nm, 670nm and 440nm were all acquired by CE318. Those data include the raw data in .k7 format and can be opened by ASTPWin. ReadMe.txt is attached for detail. Processed data (after retrieval of the raw data) in Excel format are on optical depth, rayleigh scattering, aerosol optical depth, the horizontal visibility, the near surface air temperature, the solar azimuth, zenith, solar distance correlation factors, and air column mass number.
CHEN Ling, GUO Xinping, REN Huazhong, ZOU Jie, LIU Sihan, ZHOU Chunyan, FAN Wenjie, TAO Xin
The dataset of ground truth measurement synchronizing with EO-1 Hyperion was obtained in the Yingke oasis and Huazhaizi desert steppe foci experimental areas on May 25, 2008. Observation items included: (1) Atmospheric parameters on the ICBC resort office roof by CE318 (produced by CIMEL in France). The total optical depth, aerosol optical depth, Rayleigh scattering coefficient, column water vapor in 936 nm, particle size spectrum and phase function were then retrieved from these observations. The optical depth in 1020nm, 936nm, 870nm, 670nm and 440nm were all acquired by CE318. Those data include the raw data in k7 format and can be opened by ASTPWin. ReadMe.txt is attached for detail. Processed data (after retrieval of the raw data) in Excel format are on optical depth, rayleigh scattering, aerosol optical depth, the horizontal visibility, the near surface air temperature, the solar azimuth, zenith, solar distance correlation factors, and air column mass number. (2) Ground object reflectance spectra f new-born rape and the bare land in Biandukou foci experimental area by ASD FieldSpec (350~2500 nm) from BNU. Raw data were binary files direct from ASD (by ViewSpecPro), and pre-processed data on reflectance were in Excel format. (3) Soil moisture (0-40cm) by the cutting ring and the soil temperature (0-40cm) by the thermocouple in Huazhaizi desert No. 1 plot and the windbreak forest; and soil moisture and the soil temperature (0-100cm) in Yingke oasis maize field. Data were archived in Excel format. (4) LAI. The maximum leaf length and width of each alfalfa and barley were measured. Data were archived in Excel format. (5) Coverage of maize and wheat in Yingke oasis maize field, of vegetation (Reaumuria soongorica) in Huazhaizi desert No. 1 and 2 plots by the self-made coverage instrument and the camera (2.5m-3.5m above the ground). Based on the length of the measuring tape and the bamboo pole, the size of the photo can be decided GPS date were also collected and the technology LAB was applied to retrieve the coverage of the green vegetation. Besides, such related information as surroundings environment was also recorded. Data included the primarily measured image and final fraction of vegetation coverage.
CHEN Ling, QIAN Yonggang, REN Huazhong, WANG Haoxing, YAN Guangkuo, GE Yingchun, SHU Lele, WANG Jianhua, XU Zhen, GUANG Jie, LI Li, XIN Xiaozhou, ZHANG Yang, ZHOU Chunyan, TAO Xin, YAN Binyan, YAO Yanjuan
The dataset of ground truth measurement synchronizing with MODIS was obtained in the Linze grassland foci experimental area on Jun. 22, 2008. Simultaneous east-west ground measurements on the canopy temperature, the half-height temperature and the land surface radiative temperature were carried out by the hand-held infrared thermometer at intervals of 125m in 8 quadrates (2km×2km), No.1 quadrate (H01-H08) on Jun. 22, No.2 quadrate (H09-H16) on Jun. 23,No.3 quadrate (H17-H24) on Jun. 22, No.4 quadrat (H25-H32) on Jun. 23, No.5 quadrate (H33-H40) on Jun. 22, No.6 quadrate (H41-H48) on Jun. 23, No,7 quadrate (H49-H56) and No.8 quadrate (H57-H64) on Jun. 23. Data were archived in Excel format. See WATER: Dataset of setting of the sampling plots and stripes in the foci experimental area of Linze station for more information.
CHAO Zhenhua, NIAN Yanyun, WANG Xufeng, LIANG Wenguang
The dataset of diurnal FPAR change observations was obtained in the Yingke oasis foci experimental areas. Observation items included: (1) Maize canopy reflectance spectra by ASD and 50% grey board, leaf SPAD by the chlorophyll meter and leaf photosynthesis by LI-6400 in Yingke oasis maize field on Jul. 5, 2008 (fixed point observations from 10:00-20:00 at intervals of one hour, and half an hour from 16:00) Besides, Photo: photosynthetic rate (µmol CO2 m-2 s-1), Cond: stomatal conductance (mol H2O m-2 s-1), Ci: intercellular CO2 viscosity (µmol CO2 mol-1), Trmmol: transpiration rate (mmol H2O m-2 s-1), VpdL: vapor pressure deficiency of leaves (kPa), Tleaf: leaf temperature (°C), ParIn_µm: active radiation of interior photosynthesis (µmol m-2 s-1), and ParOutµm: active radiation of outdoor photosynthesis (µmol m-2 s-1) were all archived. (2) Maize canopy reflectance spectra, leaf photosynthesis and diurnal FPAR change by ASD (Institute of Remote Sensing Applications), 50% grey board (Institute of Remote Sensing Applications), LI-6400 (Institute of Remote Sensing Applications) and SUNSCAN (Beijing academy of Agriculture and Forestry Sciences). Based on calibration lamp data (serial number: 64831), radiance spectrum on Jul. 9 by 1050 spectrometer (Beijing academy of Agriculture and Forestry Sciences) and 50% grey board and 99% white board calibration data, the spectrum data were preprocessed. Calibration was undertaken in accordance with the following precedures: a) The original DN was converted into radiance and further into readable EXCEL format by the spectrometer-matched calibration lamp data and ASD. b) Solar radiance was got by 99% white board radiance. solar radiance=the reference board radiance/the reference board reflectance. c) Spectrum from Agriculture and Forestry Sciences was sampled at an interval of 1.438nm, which was made into data at 1nm intervals by segmentation interpolation. d) Based on b=16.087a (where a is radiance before fitting and b after fitting), radiance data got by 68731 spectrograph were processed. The original maize leaf photosynthesis data (by LI-6400) were introduced into EXCEL format, diurnal changes of each leaf were archived as one single unit according to leaf classification. Maize FPAR (the fraction of photosynthetically active radiation) was got by FPAR= (canopyPAR－surface transmissionPAR－canopy reflection PAR+surface reflectionPAR) /canopy PAR; APAR= FPAR×canopy PAR. The unit for PAR was µmol m-2 s-1. The data included number (the whole leaf), observation time (hh:mm:ss), upper light (µmol m-2 s-1), upper reflectivity (µmol m-2 s-1), lower light (µmol m-2 s-1), lower reflectivity (µmol m-2 s-1) and Spread: variation coefficients of the probe optical intensity.
WANG Dacheng, YANG Guijun, CHENG Zhanhui, Liu Liangyun
This data includes experimental data of grassland interception control and observation data of maximum water holding capacity of grassland. The maximum water holding capacity experiment was carried out in 2011. The main vegetation types selected are Carex, Polygonum viviparum, Plantago asiatica and Potentilla chinensis. The maximum water holding capacity experiment was carried out on each type of samples and the samples were photographed. The specific data obtained are shown in the document. The grassland canopy interception was carried out in the growing season of 2012, and was completed by artificial rainfall control experiment. At the end of the growing season, the main types of grassland in the basin were sampled according to grazing and grazing ban. During artificial rainfall, rainfall and penetrating rainfall are recorded every 1min. Finally, the grassland canopy interception is calculated by the difference between rainfall and penetrating rainfall.
ZHAO Chuanyan, MA Wenying
Leaf area index (LAI), as a structural parameter of vegetation canopy, is an important input parameter for many inversion models such as energy and biomass inversion model. Firstly, vegetation points and ground points are separated in Terrasolid software. Then the transmittance of laser points is calculated, and the transmittance is the proportion of ground points to all points. After laser pulse hits the canopy, some energy passes through the voids between branches and leaves and continues to move forward until the energy is blocked, so some laser points will finally reach the ground. In this study, the ratio of the energy passing through the avoids to the energy of the canopy is used as the Laser Penetration Index (LPI). The LPI of each sample point at each scale in the study area was calculated.
ZHAO Chuanyan, MA Wenying
Background: this data interchange is the first data interchange of the key project of "integrated study of eco-hydrological processes in heihe basin", "genomics research on drought tolerance mechanism of typical desert plants in heihe basin".The main research targets of the key projects is a typical sand desert plants are Holly, using the current international advanced a new generation of gene sequencing technology to the whole genome sequence and gene transcription of Holly group sequence decoding, so as to explore related to drought resistance gene and gene groups, and transgenic technology in model to verify their drought resistance in plants. Process and content: as genome sequencing requires special sequencing equipment, the project is huge and the process is complex (mainly including genome library construction, sequencing, data analysis and genome assembly), so it needs to be completed by a professional sequencing company.After contacting with sequencing companies, we learned that before sequencing an unknown genome, the size and complexity of the genome should be predicted, which is a necessary prerequisite for designing sequencing schemes and strategies.Therefore, in 2013, we mainly predicted the chromosome composition, genome size and complexity of sand Holly, and successfully established the extraction and purification method of its genomic DNA.The results showed that the plant was diploid, the genome was composed of 9 staining lines (18 lines of diploid), and the genome size was 1.07G.The quality test results of the genomic DNA indicated that the requirements of the obtained DNA complex sequencing have been sent to the sequencing company for library construction and sequencing, which is now in progress.In addition, in order to obtain a large number of uniform plant materials, we have discussed the induction of callus, which has been successful.Due to these reasons, we were unable to complete the genome sequencing and submit the relevant data of sand Holly in accordance with the original plan of the project this year, mainly because we did not count the predicted contents of the genome before. Data usage: the data obtained in this year on ploidy, karyotype composition and genome size of lycopodium SPP.The success of the callus induction provides a high-quality material guarantee for the subsequent transcriptome sequencing and drought-resistance mechanism research experiments, and it is also a new contribution to the cytological and physiological research of the plant.
HE Junxian, GU Lifei
The dataset investigated the growth status of plants and leaf morphological indexes of single and conjoined red sand and pearl in the middle and lower reaches of heihe river basin in 2013. The growth indexes were crown width, plant height, and biomass of fine roots and thick roots.Leaf shape indicators are: length, width, thickness, and leaf area, volume, etc.The experimental observation indexes are: leaf nitrogen content, water potential, gas exchange data, chlorophyll fluorescence data. Data include: field observation data and explanatory documents.
SU Peixi
The year-end ecological investigation was conducted in the late September and early October when plants stopped growing. There are 8 investigation and observation fields, they are: piedmont desert, piedmont Gobi, desert in the middle, Gobi in the middle reaches, desert in the middle reaches, downstream desert, downstream Gobi, and downstream desert, the size of each filed is 40m×40m. Three large quadrats of 20m×20m were selected in each observation field, named S1, S2, and S3, to conduce the regular shrub investigation; four small quadrats were selected from each large quadrat with a size of 5m×5m, named A, B, C, D, to conduct herbal investigation.
SU Peixi
In July and mid August 2012, plant species: Caragana. Using Li-6400 portable photosynthesis system (li-cor, USA) and li-3100 leaf area meter, the photosynthetic physiological characteristics of desert plants were observed. The symbols in the observation data have the following meanings: Obs, number of observations;Photo, net photosynthetic rate, moles of CO2 times m minus 2 times s minus 1; Cond, stomatal conductance, mol H2O•m -- 2•s -- 1;Ci, intercellular CO2 concentration, moles of CO2 times mol-1; Trmmol, transpiration rate, mmol H2O•m -- 2•s -- 1;Vpdl, water vapor pressure deficit, kPa; Area, leaf Area, cm2;Tair, atmospheric temperature, ℃; Tleaf, leaf surface temperature, ℃;CO2R, CO2 concentration in the reference chamber, moles of CO2•mol-1; CO2S, sample chamber CO2 concentration, moles of CO2•mol-1;H2OR, water in the reference chamber, mmol H2O•mol-1; H2OS, sample chamber moisture, mmol H2O•mol-1;PARo, photon flux density, mole •m -- 2•s -- 1; Rh-r, reference room air relative humidity, %;Rh-s, relative humidity of air in sample room, %; PARi, photosynthetic effective radiation, moles •m -- 2•s -- 1;Press, atmospheric pressure, kPa; Others are the state parameters of the instrument at the time of measurement.
SU Peixi
A small lysimeter was made to simulate the natural conditions and select typical desert plants as the objects to study the water consumption of drought stress treatment. Repeat 3 times for each plant. In 2012, the soil water content was kept at (20 ± 5)% of the field water capacity, and experiments on physiological water demand and water consumption were carried out under stress. In 2013, the soil water content was kept at (10 ± 3)% of the field water capacity, and further experiments on water consumption and water consumption law were carried out under drought stress.
SU Peixi
As determined in mid-august 2013, planting species: bubbly spines (different habitats are mid-range intermountain lowland and gobi), red sand (different habitats are mid-range gobi and downstream gobi). Using the brother company of LI - 6400 Portable Photosynthesis System (Portable Photosynthesis System, LI - COR, USA) and LI - 3100 leaf area meter, etc., to the desert plant photosynthetic physiological characteristics were observed. The symbolic meaning of the observed data is as follows: Obs，observation frequency ； Photo ，net photosynthetic rate，μmol CO2•m–2•s–1； Cond stomatal conductance，mol H2O•m–2•s–1 ; Ci, Intercellular CO2 concentration, μmol CO2•mol-1； Trmmol，transpiration rate，mmol H2O•m–2•s–1； Vpdl，Vapor pressure deficit，kPa； Area，leaf area，cm2； Tair，free air temperature ，℃； Tleaf，Leaf temperature，℃； CO2R，Reference chamber CO2 concentration，μmol CO2•mol-1； CO2S，Sample chamber CO2 concentration，μmol CO2•mol-1； H2OR，Reference chamber moisture，mmol H2O•mol-1； H2OS，Sample chamber moisture，mmol H2O•mol-1； PARo，photon flux density，μmol•m–2•s–1； RH-R，Reference room air relative humidity，%； RH-S，Relative humidity of air in sample room，%； PARi，Photosynthetic effective radiation，μmol•m–2•s–1； Press，barometric pressure，kPa； Others are the state parameters of the instrument at the time of measurement.
SU Peixi
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