In order to describe the distribution pattern of genetic diversity of the main domesticated animals in the Qinghai Tibet Plateau and its surrounding areas, clarify their genetic background, and establish the corresponding genetic resource database, the undergraduate team collected local animals in Dali, Yunnan, Shangri La, Mangkang, Luqu, Chayu, Changdu, Hetian and Yili regions from 2018 to 2019 The blood or tissue samples of the animals were collected, and the corresponding individual photos were taken at the same time. Each folder contains a set of photos of local domestic animals and a sample information sheet. Photos are stored in JPG format. The information table records the basic sample information such as species, species, detailed sampling place, sample type, collection time, collector and storage method, and stores them in the form of Excel.
YIN Tingting, PENG Minsheng
In order to collect the characteristic Domestic Animal Germplasm Resources in Qinghai Tibet Plateau and explore the molecular markers that affect the quality of the germplasm resources, the scientific research team of task five sub project 2019qzk05010704 extensively collected samples of Qinghai Tibetan sheep and Qinghai fine wool sheep in Haibei and Haixi of Qinghai Province from 2019 to 2020, and established the first and second core groups in Ledu agricultural experimental station and Sanjiaocheng sheep breeding farm of Qinghai Province. This data set contains a lambing information table, which records the lambing records of 2074 sheep. The information table includes basic sample information such as gender, lambing time, birth weight, etc., which is saved in Excel form. Individual photos were saved in JPG format and submitted to the "photo video of the second Qinghai Tibet scientific expedition (2019qzk0501) (2020)" dataset. This data set can be used in combination with physical samples to screen individual sheep with superior heterotopic sites for marker assisted selection, propagation and generation selection, and to cultivate families with special germplasm resources.
ZHAO Kai
In order to investigate the species, dispersal location and ecological impact of alien fish on the local indigenous fish in the Qinghai Tibet Plateau, the scientific research team of task 5 sub project 2019qzk05010304 investigated the lower reaches of Lhasa River and Yarlung Zangbo River from 2019 to 2020. This dataset contains a sample information table, which includes fish species, sample point information, sampling time, collector and other basic sample information, and is saved in the form of Excel. A metadata description document, saved in the form of Excel table. 160 photos were saved in JPG format and submitted to the "photo video of the second Qinghai Tibet scientific expedition (2019qzk0501) (2020)" dataset.
XIONG Wen
From September 5 to September 26, 2020, the bird research team of the Institute of zoology, Chinese Academy of Sciences, composed of eight people, including Zhang Dezhi, the sub project leader, respectively inspected yadonggou, Yadong County, Xigaze City, chentanggou, Dingjie County, and zhangmugou, Nyalam County, Himalayan region, and successfully completed this year's field research. The observation data is composed of bird species names, observation sites and observation time, including not only the Himalayan region, but also a small number of sites. The collected bird species data were also incorporated into the data set. The corresponding photos and videos were collected into the data set of the animal special topic "the second Qinghai Tibet scientific research plateau animal diversity protection and sustainable use (2019qzk0501) photo and video (2020)".
ZHANG Dezhi
In order to reveal the spatial pattern of bird diversity distribution and explore the construction mechanism of Himalayan bird community. In 2020, a total of 775 bird survey sites will be collected in Chayu and Motuo counties of Nyingchi Prefecture, Tibet Autonomous Region. This data set contains a sample information table, which contains 4029 bird observation data. Each information includes species name, Latin name, sampling place, survey time, investigator, altitude, habitat type, distance from the midpoint and other basic information, which is stored in Excel. The corresponding photos and videos were collected into the data set of the animal special topic "the second Qinghai Tibet scientific research plateau animal diversity protection and sustainable use (2019qzk0501) photo and video (2020)".
WU Fei
1) Data content: species list and distribution data of Phrynocephalus and Eremais in Tarim Basin, including class, order, family, genus, species, and detailed distribution information including country, province, city and county; 2) Data source and processing method: Based on the field survey of amphibians and reptiles in Tarim Basin from 2008 to 2020, and recording the species composition and distribution range of Phrynocephalus and Eremias in this area; 3) Data quality description: the investigation, collection and identification of samples are all conducted by professionals, and the collection of samples information are checked to ensure the quality of distribution data; 4) Data application results and prospects: Through comprehensive analysis of the dataset, the list of species diversity and distribution can provide important data for biodiversity cataloguing in arid central Asia, and provide scientific basis for assessing biodiversity pattern and formulating conservation strategies.
GUO Xianguang
This data is the hydrological data of kuzhan hydrological station in the middle reaches of the Xier river. The station is jointly built by Urumqi Institute of desert meteorology of China Meteorological Administration, Institute of water energy and ecology of Tajik National Academy of Sciences and Tajik hydrometeorological Bureau. The data can be used for scientific research such as water resources assessment and water conservancy projects in Central Asia. Data period: November 2, 2019 to December 5, 2020. Data elements: Hourly velocity (M / s), hourly water level (m) and hourly rainfall (m) Site location: 40 ° 17 ′ 38 ″ n, 69 ° 40 ′ 18 ″ e, 320m
ZHANG Na
The global land surface characteristic parameter (LAI) product was used with a spatial resolution of 5 km. The product uses generalized regression neural network method to retrieve Lai from AVHRR surface reflectance data. In this study, 12 issues of Lai data products from June to August of each year in five Central Asian countries, Mongolia and Northern China from 1981 to 2017 were downloaded from the national science and technology infrastructure platform National Earth System Science Data Center. These images are cropped by ArcGIS software, and the maximum value is calculated to obtain the spatiotemporal data set of the largest Lai. Among them, five Central Asian countries include Turkmenistan, Kyrgyzstan, Kazakhstan, Tajikistan and Uzbekistan; northern China refers to the area north of the Yangtze River in China.
ZHANG Na
The global land surface characteristic parameter (LAI) product was used with a spatial resolution of 5 km. The product uses generalized regression neural network method to retrieve Lai from AVHRR surface reflectance data. In this study, 12 issues of Lai data products from June to August of each year in five Central Asian countries, Mongolia and Northern China from 1981 to 2017 were downloaded from the national science and technology infrastructure platform National Earth System Science Data Center. These images are cropped by ArcGIS software, and the maximum value is calculated to obtain the spatiotemporal data set of the largest Lai. Among them, five Central Asian countries include Turkmenistan, Kyrgyzstan, Kazakhstan, Tajikistan and Uzbekistan; northern China refers to the area north of the Yangtze River in China.
ZHANG Na
The global land surface characteristic parameter (LAI) product was used with a spatial resolution of 5 km. The product uses generalized regression neural network method to retrieve Lai from AVHRR surface reflectance data. In this study, 12 issues of Lai data products from June to August of each year in five Central Asian countries, Mongolia and Northern China from 1981 to 2017 were downloaded from the national science and technology infrastructure platform National Earth System Science Data Center. These images are cropped by ArcGIS software, and the maximum value is calculated to obtain the spatiotemporal data set of the largest Lai. Among them, five Central Asian countries include Turkmenistan, Kyrgyzstan, Kazakhstan, Tajikistan and Uzbekistan; northern China refers to the area north of the Yangtze River in China.
ZHANG Na
1) Data content: species list of amphibious and reptile in Tibet, including class, order, family, genus, species; 2) Data source and processing method: Based on the field survey of amphibians and reptiles in Tibet from 2010 to 2019, and recording the species composition and distribution range of amphibians and reptiles in this area; 3) Data quality description: the investigation, collection and identification of samples are all conducted by professionals, and the collection of samples, longitude, latitude and altitude information are checked to ensure the quality of distribution data; 4) Data application results and prospects: We selected amphibians and reptiles as model species for study. we obtained data on population size and distribution range, and provide scientific basis for assessing biodiversity pattern and formulating conservation strategies.
CHE Jing
The birds along elevation gradients in Gangrigabu Mountains were investigated by point count method. With a 400-meter elevational gradient, elevation zones were set up in the survey area. Five elevation zones were built in the north slope from TongMai Town to Galong Temple in Bome County, and 8 elevation zones were built in the south slope from Jiefang Bridge to Galongla in Medog County. So that we can make clear about the pattern and maintenance mechanism of bird diversity along elevation gradients in this region. The data of bird diversity and distribution will be used to further explore the key scientific issues such as the impact of climate change on bird diversity and adaptation strategies, and the response and protection strategies of bird species diversity under the global climate change.
YANG Xiaojun
From October to November 2020, we used both live traps and camera traps to collect mammal diversity and distributions along the elevational gradients at the Yarlung Zangbo Grand Canyon National Nature Reserve. We set trap lines for small mammals inventory, with a total of 8000 live trap nights. We collected 526 individuals and1052 tissue samples of small mammals during the field sampling. We also retrived images of 130 camera traps placed between May 2020 and October 2020. We obtained 4218 pictures of wild animals,25 species of large and medium mammals were recorded.. The camera traps were reset in the same locations after renew batteries and memory cards. Small mammal data consist of richness, abundance, traits, environmental gradients etc, and could be used to model relationship between environmental gradients and traits concatenated by richness matrix. Camera trap data could inventory endangered species in the region, and provide information to identify biodiversity hotspots and conservation priorities.
LI Xueyou
In November 2020, we made a collection in Qinghai Tibet Plateau were collected by net and electric capture methods, and the sampling area included the main water systems in Qinghai Province. A total of 30 sampling points were collected, and 685 fish specimens were collected in 12 points, including Schizothorax of loach.This work is a part of the project of “Building Methods for Detection of Aquatic Organisms in the Lake System of the Qinghai-Tibet Plateau”, using traditional fish survey data to generate a list of species in the lake system, which will then be used to combine multiple lakes in the plateau. High-throughput molecular data acquired from the system's environmental water samples and tested for visual parameters (lake size, isolation, geographic location, and spectral characteristics) that can be used to predict aquatic biodiversity.
LIU Shuwei
In order to describe the distribution pattern of genetic diversity of main domesticated animals in Qinghai Tibet Plateau and its surrounding areas, clarify their genetic background and establish corresponding genetic resource bank. In 2020, a total of 707 blood, tissue and fecal samples from 209 domesticated animals were collected in Ili area of Xinjiang Uygur Autonomous Region, including RNA samples of heart, liver, spleen, lung and kidney of 12 horses. This data set contains the species, varieties, detailed sampling places, sample types, collection time, collectors, storage methods and other basic sample information of sheep, horses, cattle, dogs, chickens, geese, goats and other species in Yili area of Xinjiang, and is stored in Excel form. This data set also contains the appearance photos of individuals sampled and stored in JPG format.
XU Feng
The data mainly include one belt, one road, the flagship species (POLYGON) and the POINT (DOT) distribution in the countries and key areas along the route, data sources IUCN and GIBF. The basic data base map of distribution map is downloaded from arconline map. One belt, one road area, is used to analyze the spatial distribution of flagship species in the key area. 1) data one belt, one road animal area (Central Asia Great Lakes region, China Brazil economic corridor and Sanjiang source National Park), and 9 species of mammals, 15 species of higher plants and fungi, 20 species of birds and 3 species of fishes. 2) data sources one by one: one belt, one road, the flagship species list and its distribution basic data: the red list of IUCN and the geographic spatial data of GBIF, and the distribution map of each species is generated by AcrMap software, and the atlas is formed. 3) Data quality description: after strict literature investigation and field investigation, each species determined the flagship standard, and strictly screened and scored according to the principle of "flagship selection standard (at least 4 of the 6 indicators)" by mammalian experts, higher botany and mycology experts, ornithology experts and ichthyology experts, and selected those with a score of more than 25 points Species atlas production. The longitude and latitude information of each species' geospatial data was checked by professionals, and the map was made according to the unified mapping standard. 4) data application one after another: one belt, one road, the survival status, ecological value and humanistic economic value of the flagship species in the "one belt and one way" area were investigated.
WANG Yuhua, ZHANG Yuanming, YANG Weikang, CHEN Yifeng, QU Yanhua, CHEN Shilong, ZHUANG Huifu, WANG Yanan, LIN Zihong
The data mainly include one belt, one road, the flagship species (POLYGON) and the POINT (DOT) distribution in the countries and key areas along the route, data sources IUCN and GIBF. The basic data base map of distribution map is downloaded from arconline map. This data is mainly one to analyze one belt, one road, the spatial layout of flagship species. 1) data one belt, one road animal along the "one belt" along the 8 countries (Pakistan, Nepal, Iran, Kazakhstan, Kyrgyzstan, Uzbekistan, Tajikistan, Burma), and 12 species of mammals, 1 species of higher plants, 23 species of birds, 9 species of fish. 2) data sources one by one: one belt, one road, the flagship species list and its distribution basic data: the red list of IUCN and the geographic spatial data of GBIF, and the distribution map of each species is generated by AcrMap software, and the atlas is formed. 3) Data quality description: after strict literature investigation and field investigation, each species determined the flagship standard, and strictly screened and scored according to the principle of "flagship selection standard (at least 4 of the 6 indicators)" by mammalian experts, higher botany and mycology experts, ornithology experts and ichthyology experts, and selected those with a score of more than 25 points Species atlas production. The longitude and latitude information of each species' geospatial data was checked by professionals, and the map was made according to the unified mapping standard. 4) data application one year and prospects: one belt, one road, 8 countries, and their survival, ecological value, and humanistic economic value were studied.
WANG Yuhua, ZHANG Yuanming, YANG Weikang, CHEN Yifeng, QU Yanhua, CHEN Shilong, ZHUANG Huifu, WANG Yanan, LIN Zihong
In order to study the relationship between the spread of vines and human activities, we re sequenced the varieties from Qinghai Tibet Plateau and its surrounding areas, as well as Pakistan, India, Nepal, Germany, Japan and other places. At the same time, the gene families were clustered, and the unique and common genes and gene families were counted. In addition, the expansion and contraction analysis of gene families and the phylogeny were also carried out Tree construction, genome-wide replication event analysis. The purpose of this study was to analyze the molecular basis of the adaptation of traditional Cranberry varieties to the plateau under the dual pressure of human activities and regional climate environment. Therefore, this study is helpful to reveal the adaptive mechanism of C. racemosa adapting to the plateau ecological environment and the influence of artificial domestication and human selection on its genetic differentiation in the process of evolution.
DUAN Yuanwen
From April 2020 to August 2020, sub project 3 collected 51 ear tissue samples of Qinghai fine wool sheep distributed in Haiyan County, Haixi Mongolian and Tibetan Autonomous Prefecture, Qinghai Province, 50 blood samples of Oula sheep in Tongde County, Hainan Tibetan Autonomous Prefecture, 50 blood samples of yak in Tongde County, Hainan Tibetan Autonomous Prefecture, 60 blood samples of Haidong donkey in Datong Hui and Tu Autonomous County, Xining City, and tissue samples A total of 211 copies. At the same time, the information of body length, body height, weight, age and gender, as well as the data of economic traits such as litter size, wool fineness and wool length were recorded. The individual photos were taken, and the information of feeding mode and epidemic situation were obtained through questionnaire survey.
TIAN Fei
In order to describe the distribution pattern of genetic diversity of the main domesticated animals in the Qinghai Tibet Plateau and its surrounding areas (Pan third polar region), and clarify its genetic background. In 2020, we selected 31 RNA tissue samples from kidney, spleen and jejunum of local commercial chicken and native chicken in Kenya. After extracting total RNA, we established a library and performed transcriptome sequencing. Sequencing produced a batch of 180g transcriptome sequencing raw data. In order to explore the domestication, migration, expansion and other historical events of domestic chicken in Pan third pole area, and further explore the adaptation mechanism of domesticated animals to dry and other harsh environment. This data set contains the excel table of basic sample information such as species, breed, sex and phenotype of 31 domestic chicken individuals, and the original data and MD5 value of three tissue transcriptome sequencing of 31 domestic chicken individuals.
PENG Minsheng
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