The dataset is the normalized difference water index (NDWI) products from 1970s to 2020 over the Tibetan Plateau。The dataset is producted based on Landsat surface reflectance dataset. It is calculated by the NDWI equation which use the difference ratio between the green band and NIR band to enhance the water information, and then to weaken the information of vegetation, soil, buildings and other targets.And the corresponding production of quality identification documents (QA) is also generated to identify the cloud, ice and snow.NDWI is usually used to extract surface water information effectively, therefore it is widely used in water resoureces, hydrology, forestry and agriculture.
A total of 52 sample sites were selected in the desert belts of Qinghai and Tibet for field sampling of aboveground biomass of vegetation during the vegetation growing season in 2019 and 2020. At the same time, the longitude, latitude and altitude of the experimental site were recorded using handheld GPS devices. The field setting method of the quadrate is as follows: select a section with uniform vegetation. When the vegetation is relatively abundant, the quadrate is set as a 10 m x10 m square plot, and when the vegetation is relatively sparse, the quadrate is set as a 30 m x30 m square plot or a 30 m x90 m rectangular plot. 3-5 small sample boxes (1m x 1m) were randomly thrown into the set sample plot to determine the specific location of the sample. Collect plant samples by sample harvesting method: register plant species, number of plants of each species and other information in sample area of 1 square meter. All kinds of plants in the quadrate were planted and mowed on the ground, and the collected herbaceous plant samples were placed in archives and marked with species, sample site name and number, collection time and other information. They were brought back to the laboratory and dried to a constant weight in a constant temperature drying oven at 65 ℃. The dry weight of the plant samples was measured. Finally, the aboveground biomass of the vegetation was calculated. In addition, two kinds of remote sensing net primary productivity (NPP) data of the 52 sample points were extracted by the longitude and latitude of the sampling points. (1) Enhanced Vegetation Index (EVI) from 2000 to 2018, and calculated the annual Integrated Enhanced Vegetation Index (IEVI). IEVI was highly correlated with net primary productivity (NPP). Can be used as a proxy indicator of net primary productivity (He et al. 2021, Science of The Total Environment). (2) Percentage of remote sensing net primary productivity (NPP) and its quality control (QC) in 2001-2020, NPP remote sensing data from MOD17A3HGF Version 6 product (https://lpdaac.usgs.gov/products/mod17a3hgfv006/), the net photosynthetic value (the total primary productivity - keep breathing) is calculated. In the sample sites with low vegetation coverage, there may be null value (NA) of remote sensing net primary productivity.
Fraction of Absorbed Photosynthetically Active Radiation (FPAR) is a key physiological variable in the study of carbon cycling and is one of the basic variables to describe vegetation ecosystems. The classification results of surface vegetation types in Qinghai-Tibet Plateau region are obtained based on the Landsat reflectance data(30m spatial resolution). According to NDVI of different vegetation types, the remote sensing inversion model is constructed to produce the growing season FPAR products for each vegetation type. This product can be used as one of the parameters to calculate vegetation carbon sequestration and evaluate vegetation ecosystem status.
The dataset is the Landsat surface reflectance products from 1980s to 2019 over the Tibetan Plateau, it is the key input parameter of many surface geophysical parameters (such as leaf area index, chlorophyll and biomass). The dataset is retrieved based on Landsat level 4 products from China satellite remote sensing ground station, and it is retrived by using the atmospheric correction based on 6S model and BRDF correction model based on C-factor .The RMSE of geometric correction is less than 12m and the RMSD of surface reflectance is less than 5%. And the corresponding production of quality identification documents (QA) is also generated to identify the cloud, ice and snow.The Landsat surface reflectance play an important role in forest, water resources, climate change.
Data content: The data set products include impervious surface products with a resolution of 10 meters in the Qinghai-Tibet Plateau, which can be used as a key parameter for related research on the Qinghai-Tibet Plateau ecosystem. Data source and processing method: Product inversion is mainly based on Sentinel series data, considering joint features, combining depth spatial features, long-time NDVI and other exponential features, and topographic features, and using random forest model to achieve impervious surface information extraction. Data quality: The overall accuracy is high. Data application results and prospects: The data set will be continuously updated and can be used to further clarify the impact of human activities on the ecosystem of the Qinghai-Tibet Plateau.
一. Data overview This data interchange is the second data interchange of "genomics research on drought tolerance mechanism of typical desert plants in heihe basin", a key project of the major research program of "integrated research on eco-hydrological processes in heihe basin".The main research goal of this project is a typical desert sand Holly plants as materials, using the current international advanced a new generation of gene sequencing technology to the whole genome sequence and gene transcription of Holly group sequence decoding, so as to explore related to drought resistance gene and gene groups, and transgenic technology in model plants such as arabidopsis and rice) verify its drought resistance. 二, data content 1.Sequencing of the genome and transcriptome of lycophylla SPP. The genome size of Mongolian Holly was about 926 Mb, GC content 36.88%, repeat sequence proportion 66%, genome heterozygosity rate 0.56%, which indicated that the genome has many repeat sequences, high heterozygosity and belongs to a complex genome.Based on the predicted sequence results, we subsequently carried out in-depth sequencing of the genome of lysiopsis SPP. The obtained data were assembled to obtain a 937 Mb genome sequence (table 1), which was basically the same as the predicted genome size.Through to the sand Holly transcriptome sequencing and sequence assembly (table 2), received more than 77000 genes coding sequence (Unigene), these sequences are comments found that most of the gene sequence and legumes and soybean, garbanzo beans and bean has a higher similarity (figure 1), consistent with the fact of sand ilex leguminous plants. 一), and the sand Holly is a leguminous plants consistent with the fact. 2.Discovery of simple repeat sequence (SSR) molecular markers of sand Holly: There is a transcriptome data set of sand Holly in the network public database, and the sample collection site is zhongwei city, ningxia.But this is the location of the project team samples in minqin county, gansu province, in order to study whether this sand in different areas of the Holly sequence has sequence polymorphism, we first identify the minqin county plant samples in the genomes of simple sequence repeat (SSR) markers (table 3), and then, compares the transcriptome sequences of plant sample, found in part of SSR molecular marker polymorphism (table 4), these molecular markers could be used for the species of plant genetic map construction, QTL mapping and genetic diversity analysis in the study. 三, data processing instructions Sample collection place: minqin county, gansu province, latitude and longitude: N38 ° 34 '25.93 "E103 ° 08' 36.77".Genome sequencing: a total of 8 genomic DNA libraries of different sizes were constructed and determined by Illumina HiSeq 2500 instrument.Transcriptome sequencing: a library of 24 transcriptome mrnas was constructed and determined by Illumina HiSeq 4000. 四, the use of data and meaning We selected a typical desert plant as the research object, from the Angle of genomics, parse the desert plant genome and transcriptome sequences, excavated its precious drought-resistant gene resources, and to study their drought resistance mechanism of favorable sand Holly this ancient and important to the utilization of plant resources, as well as the heihe river basin of drought-resistant plant genetic breeding, ecological restoration and sustainable development.
The data set includes meteorological data from the Ngari Desert Observation and Research Station from 2009 to 2017. It includes the following basic meteorological parameters: temperature (1.5 m from the ground, once every half hour, unit: Celsius), relative humidity (1.5 m from the ground, once every half hour, unit: %), wind speed (1.5 m from the ground, once every half hour, unit: m/s), wind direction (1.5 m from the ground, once every half hour, unit: degrees), atmospheric pressure (1.5 m from the ground, once every half hour, unit: hPa), precipitation (once every 24 hours, unit: mm), water vapour pressure (unit: kPa), evaporation (unit: mm), downward shortwave radiation (unit: W/m2), upward shortwave radiation (unit: W/m2), downward longwave radiation (unit: W/m2), upward longwave radiation (unit: W/m2), net radiation (unit: W/m2), surface albedo (unit: %). The temporal resolution of the data is one day. The data were directly downloaded from the Ngari automatic weather station. The precipitation data represent daily precipitation measured by the automatic rain and snow gauge and corrected based on manual observations. The other observation data are the daily mean value of the measurements taken every half hour. Instrument models of different observations: temperature and humidity: HMP45C air temperature and humidity probe; precipitation: T200-B rain and snow gauge sensor; wind speed and direction: Vaisala 05013 wind speed and direction sensor; net radiation: Kipp Zonen NR01 net radiation sensor; atmospheric pressure: Vaisala PTB210 atmospheric pressure sensor; collector model: CR 1000; acquisition interval: 30 minutes. The data table is processed and quality controlled by a particular person based on observation records. Observations and data acquisition are carried out in strict accordance with the instrument operating specifications, and some data with obvious errors are removed when processing the data table.
This data is digitized from the "Naiman Banner Desertification Types and Land Consolidation Zoning Map" of the drawing. The specific information of this map is as follows: * Editors: Zhu Zhenda and Qiu Xingmin * Editor: Feng Yushun * Re-photography and Mapping: Feng Yushun, Liu Yangxuan, Wen Zi Xiang, Yang Taiyun, Zhao Aifen, Wang Yimou, Li Weimin, Zhao Yanhua, Wang Jianhua * Field trips: Qiu Xingmin and Zhang Jixian * Cartographic unit: compiled by Desert Research Office of Chinese Academy of Sciences * Publishing House: Shanghai China Printing House * Scale: 1: 150000 * Published: May 1984 * Legend: Severe Desertification Land, Intensely Developed Desertification Land, Developing Desertification Land, Potential Desertification Land, Non-desertification Land, Fluctuating Sandy Loess Plain, Forest and Shrub, Saline-alkali Land, Mountain Land, Cultivated Land and Midian Land 2. File Format and Naming Data is stored in ESRI Shapefile format, including the following layers: Naiman banner desertification type map, rivers, roads, reservoirs, railways, zoning 3. Data Attributes Desertification Class Vegetation Background Class Desertified land and cultivated sand dunes under development. Midland in Saline-alkali Land Severely desertified land Reservoir Trees and shrubbery Mountain Strongly developing desertified land Potential desertified land Lakes Non-desertification land Undulating sand-loess plain 2. Projection information: Angular Unit: Degree (0.017453292519943295) Prime Meridian: Greenwich (0.000000000000000000) Datum: D_Beijing_1954 Spheroid: Krasovsky_1940 Semimajor Axis: 6378245.000000000000000000 Semiminor Axis: 6356863.018773047300000000 Inverse Flattening: 298.300000000000010000
In the previous project, three different types of desert investigation and observation sites in the lower reaches of Heihe River were set up. Different kinds of desert plants with the same average growth and size as the observation site were selected for the above ground biomass and underground biomass total root survey. The dry weight was the dry weight at 80 ℃, and the root shoot ratio was the dry weight ratio of the underground biomass to the aboveground biomass. Species: Elaeagnus angustifolia, red sand, black fruit wolfberry, bubble thorn, bitter beans, Peganum, Tamarix and so on.
The data is the distribution map of 100,000 deserts in Qinghai Lake Basin. This data uses 2000 TM image as the data source for interpretation, extraction and revision. Remote sensing and geographic information system technology are combined with the mapping requirements of a scale of 1: 100,000 to carry out thematic mapping of deserts, sands and gravelly Gobi. Data attribute table: area (area), perimeter (perimeter), ashm_ (sequence code), class (desert code) and ashm_id (desert code), of which the desert code is as follows: mobile sand 2341010, semi-mobile sand 2341020, semi-fixed sand 2341030, Gobi desert 2342000 and saline-alkali land 2343000.
Contact SupportNorthwest Institute of Eco-Environment and Resources, CAS 0931-4967287 firstname.lastname@example.org
LinksNational Tibetan Plateau Data Center