Hi-C sequencing data of cyanine genome

Hi-C sequencing data of cyanine genome


Based on the high-quality genomic sequence analysis, the high-quality genome sequences can be obtained. Therefore, through this technology, the project team divides the sequences in the genome sequence sketch into groups that are consistent with the chromosome number of the species, and determines the order and orientation of all sequences in each group. After that, we can combine the reference vines genome, transcriptome assembly sequence (EST sequence), related species and genetic map data The accuracy of grouping and the sequence and direction between sequences were evaluated.


File naming and required software

File name: the sequencing data is stored in text format, and the name of the file is "20181106 Lachesis"_ assembly.fasta ”Of which, 2018 represents the year and 1106 represents the date. Data reading mode: the data can be opened directly with a text program. (e.g. EDITPLUS)


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Cite as:

Duan, Y. (2020). Hi-C sequencing data of cyanine genome. A Big Earth Data Platform for Three Poles, DOI: 10.11888/Ecolo.tpdc.271069. CSTR: 18406.11.Ecolo.tpdc.271069. (Download the reference: RIS | Bibtex )

Using this data, the data citation is required to be referenced and the related literatures are suggested to be cited.


Support Program

Pan-Third Pole Environment Study for a Green Silk Road-A CAS Strategic Priority A Program (No:XDA20000000)

Copyright & License

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License: This work is licensed under an Attribution 4.0 International (CC BY 4.0)


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Geographic coverage
East: 97.00 West: 95.00
South: 31.00 North: 32.00
Details
  • Temporal resolution: Yearly
  • Spatial resolution: -
  • File size: 395 MB
  • Views: 896
  • Downloads: 0
  • Access: Protection period
  • Temporal coverage: 2018-06-01 To 2018-11-06
  • Temporal coverage: 2018
  • Updated time: 2021-09-16

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Contacts
: DUAN Yuanwen  

Distributor: A Big Earth Data Platform for Three Poles

Email: poles@itpcas.ac.cn

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