The ground sample data was collected by LAI-2000 canopy analyzer, and the collection area was located in Dayekou, Wuxing Village (2012) and other areas. The main measure of vegetation is corn. The LAI value of the corn was obtained using the LAI2000, and the observation was repeated twice in a pattern of “one up and four down”. The leaf area of each leaf of the corn plant was obtained using CD202, and a total of three corns were collected.
The forest hydrology experimental area of Heihe River integrated remote sensing experiment includes the dense observation area of Dayekou basin and the dense observation area of Pailugou basin. Due to the concentrated distribution of the fixed sample plots in the drainage ditch basin, these sample plots lack of representativeness to the forest of the whole dayokou basin, so in June 2008, 43 temporary forest sample plots were set up in the whole dayokou basin. The data set is the ground observation data of the 43 temporary plots. In addition to the measurement and recording of stand status and site factors, Lai was also observed. The instruments used to measure each wood in the sample plot are mainly tape, DBH, flower pole, tree measuring instrument and compass. The DBH, tree height, height under branch, crown width in cross slope direction, crown width along slope direction and single tree growth were measured for each tree. WGS84 latitude and longitude coordinates of the center point of the sample plot were measured with different hand-held GPS, and the positioning error was about 5-30m. Other observation factors include: Forest Farm, slope direction, slope position, slope, soil thickness, canopy density, etc. The implementation time of these temporary sample plots is from 2 to 30 June 2008. The data set can provide ground data for the development of remote sensing inversion algorithm of forest structure parameters.
The data set mainly includes observation data of each tree in the super site, and the observation time is from June 2, 2008 to June 10, 2008. The super site is set around the Dayekou Guantan Forest Station. Since the size of the super site is 100m×100m, in order to facilitate the forest structure parameter survey, the super site is divided into 16 sub-sample sites, and tally forest measurement is performed in units of sub-samples. The tally forest measurement factors include: diameter, tree height, height under branch, crown width in transversal slope direction, crown width in up and down slope direction, and tindividual tree growth status. The measuring instruments are mainly: tape, diameter scale, laser altimeter, ultrasonic altimeter, range pole and compass. The data set also records the center point latitude and longitude coordinates of 16 sub-samples (measured by Z-MAX DGPS). The data set can be used for verification of remote sensing forest structure parameter extraction algorithm. The data set, together with other observation data of the super site, can be used for reconstruction of forest 3D scenes, establishment of active and passive remote sensing mechanism models, and simulation of remote sensing images,etc.
The data set is the meteorological and observational data of hulugou shrub experimental area in the upper reaches of Heihe River, including meteorological data, albedo data and evapotranspiration data under shrubs. 1. Meteorological data: Qilian station longitude: 99 ° 52 ′ E; latitude: 38 ° 15 ′ n; altitude: 3232.3m, scale meteorological data from January 1, 2012 to December 31, 2013. Observation items include: temperature, humidity, vapor pressure, net radiation, four component radiation, etc. The data are daily scale data, and the calculation period is 0:00-24:00 2. Albedo: daily surface albedo data from January 1, 2012 to July 3, 2014, including snow and non snow periods. The measuring instrument is the radiation instrument on the 10m gradient tower in hulugou watershed. Among them, the data from August 4 to October 2, 2012 was missing due to instrument circuit problems, and the rest data quality was good 3. Evapotranspiration: surface evapotranspiration data of Four Typical Shrub Communities in hulugou watershed. The observation period is from July 18 to August 5, 2014, which is the daily scale data. The data include precipitation data, evaporation and infiltration data observed by lysimeter. The data set can be used to analyze the evapotranspiration data of alpine shrubs and forests. The evapotranspiration of grassland under canopy was measured by a small lysimeter with a diameter of 25 cm and a depth of 30 cm. Two lysimeters were set up in each shrub plot, and one lysimeter was set for each shrub in transplanting experiment. The undisturbed undisturbed soil column with the same height as the barrel is placed in the inner bucket, and the outer bucket is buried in the soil. During the embedding, the outer bucket shall be 0.5-1.0 cm higher than the ground, and the outer edge of the inner barrel shall be designed with a rainproof board about 2.0 cm wide to prevent surface runoff from entering the lysimeter. Lysimeter was set up in the nearby meteorological stations to measure grassland evapotranspiration, and a small lysimeter with an inner diameter of 25 cm and a depth of 30 cm was also set up in the sample plot of Picea crassifolia forest to measure the evaporation under the forest. All lysimeters are weighed at 20:00 every day (the electronic balance has a sensing capacity of 1.0 g, which is equivalent to 0.013 mm evaporation). Wind proof treatment should be taken to ensure the accuracy of measurement. Data processing method: evapotranspiration is mainly calculated by mass conservation in lysimeter method. According to the design principle of lysimeter lysimeter, evapotranspiration is mainly determined by the quality difference in two consecutive days. Since it is weighed every day, it is calculated by water balance.
The dataset is Lai data of ground sample points in Heihe River Basin, collected by LAI-2000 canopy analyzer. The collection area is located in Zhangye rural demonstration base, Ejina Banner, Jiuquan Satellite Center (2011) and other areas. The main measured vegetation is corn. The Lai value of maize was obtained by using lai2000, and the observation was repeated twice in the mode of one up four down. Cd202 was used to obtain the leaf area of each leaf of maize plant, and three maize plants were collected.
This data includes three parts of data, namely shrub water holding experiment, shrub interception experiment and shrub transpiration experiment data. Shrub water holding experiment: select the two shrub types of Caragana jubata and Potentilla fruticosa, respectively pick the branches and leaves of the two vegetation types, weigh their fresh weight, carry out water holding experiment, measure the saturated weight of branches and leaves, dry weight of branches and leaves, dry weight of branches and leaves after completion, and finally obtain the data of branches, leaves and total water holding capacity. Shrub interception experiment: two shrubs, Caragana jubata and Potentilla fruticosa, were also selected and investigated. 30 rain-bearing cups were respectively arranged under the two shrubs. after each rainfall, penetration rainfall was measured and observed from June 1, 2012 to September 10, 2012. Shrub Transpiration Experiment: Potentilla fruticosa on July 14, Caragana jubata on August 5, Salix gilashanica on August 15, 2012. The measurement is made every hour according to the daily weather conditions.
The survey data of vegetation quadrat in the middle reaches of Heihe River consists of the field survey data in 2013 and 2014, including the vegetation and soil data of the survey quadrat. The data of each survey sample includes the following information: sample longitude and latitude, sample size, elevation, sample overview, plant name, plant height, crown width, coverage, total coverage, number of trees, plant spacing, row spacing, large row spacing, DBH. The soil is divided into 6 layers according to 0-100cm below the ground, which are 0-10cm, 10-20cm, 20-40cm, 40-60cm, 60-80cm and 80-100cm respectively.
The sample plot survey data are as follows: in August 2013, 30 forest sample plots were set up in tianlaochi basin, with the sample plot specification of 10 m×20 m, and the long side of the sample plot was parallel to the slope direction, including 26 Qinghai spruce forests, 2 Qilian yuanberlin forests and 2 spruce-cypress mixed forests. within the sample plot, the diameter at breast height (diameter at trunk height of 1.3 m) of each tree was measured by using a ruler. Using hand-held ultrasonic altimeter to measure the tree height and the height under branches (the height of the first living branch at the lower end of the crown) of each tree, measuring the crown width in the north-south direction and the east-west direction by using a tape scale, and positioning the sample plot by using differential GPS. Taking the carbon storage data of the sample plot as the optimal control condition, using Kriging interpolation to obtain the biomass spatial distribution map driving field, using HASM algorithm to simulate the forest biomass spatial distribution map of the waterlogging pool, the simulation results conform to the vegetation distribution law of the study area, and obtain better effects. Resolution 1m
一. Data overview This data interchange is the second data interchange of "genomics research on drought tolerance mechanism of typical desert plants in heihe basin", a key project of the major research program of "integrated research on eco-hydrological processes in heihe basin".The main research goal of this project is a typical desert sand Holly plants as materials, using the current international advanced a new generation of gene sequencing technology to the whole genome sequence and gene transcription of Holly group sequence decoding, so as to explore related to drought resistance gene and gene groups, and transgenic technology in model plants such as arabidopsis and rice) verify its drought resistance. 二, data content 1.Sequencing of the genome and transcriptome of lycophylla SPP. The genome size of Mongolian Holly was about 926 Mb, GC content 36.88%, repeat sequence proportion 66%, genome heterozygosity rate 0.56%, which indicated that the genome has many repeat sequences, high heterozygosity and belongs to a complex genome.Based on the predicted sequence results, we subsequently carried out in-depth sequencing of the genome of lysiopsis SPP. The obtained data were assembled to obtain a 937 Mb genome sequence (table 1), which was basically the same as the predicted genome size.Through to the sand Holly transcriptome sequencing and sequence assembly (table 2), received more than 77000 genes coding sequence (Unigene), these sequences are comments found that most of the gene sequence and legumes and soybean, garbanzo beans and bean has a higher similarity (figure 1), consistent with the fact of sand ilex leguminous plants. 一), and the sand Holly is a leguminous plants consistent with the fact. 2.Discovery of simple repeat sequence (SSR) molecular markers of sand Holly: There is a transcriptome data set of sand Holly in the network public database, and the sample collection site is zhongwei city, ningxia.But this is the location of the project team samples in minqin county, gansu province, in order to study whether this sand in different areas of the Holly sequence has sequence polymorphism, we first identify the minqin county plant samples in the genomes of simple sequence repeat (SSR) markers (table 3), and then, compares the transcriptome sequences of plant sample, found in part of SSR molecular marker polymorphism (table 4), these molecular markers could be used for the species of plant genetic map construction, QTL mapping and genetic diversity analysis in the study. 三, data processing instructions Sample collection place: minqin county, gansu province, latitude and longitude: N38 ° 34 '25.93 "E103 ° 08' 36.77".Genome sequencing: a total of 8 genomic DNA libraries of different sizes were constructed and determined by Illumina HiSeq 2500 instrument.Transcriptome sequencing: a library of 24 transcriptome mrnas was constructed and determined by Illumina HiSeq 4000. 四, the use of data and meaning We selected a typical desert plant as the research object, from the Angle of genomics, parse the desert plant genome and transcriptome sequences, excavated its precious drought-resistant gene resources, and to study their drought resistance mechanism of favorable sand Holly this ancient and important to the utilization of plant resources, as well as the heihe river basin of drought-resistant plant genetic breeding, ecological restoration and sustainable development.
The sample plot survey data are as follows: in August 2013, 30 forest sample plots were set up in tianlaochi basin, with the sample plot specification of 10 m×20 m, and the long side of the sample plot was parallel to the slope direction, including 26 Qinghai spruce forests, 2 Qilian yuanberlin forests and 2 spruce-cypress mixed forests. within the sample plot, the diameter at breast height (diameter at trunk height of 1.3 m) of each tree was measured by using a ruler. Using hand-held ultrasonic altimeter to measure the tree height and the height under branches (the height of the first living branch at the lower end of the crown) of each tree, measuring the crown width in the north-south direction and the east-west direction by using a tape scale, and positioning the sample plot by using differential GPS. Taking the carbon storage data of the sample plot as the optimal control condition, using Kriging interpolation to obtain the biomass spatial distribution map driving field, using HASM algorithm to simulate the forest biomass spatial distribution map of the waterlogging pool, the simulation results conform to the vegetation distribution law of the study area, and obtain better effects.
Contact SupportNorthwest Institute of Eco-Environment and Resources, CAS 0931-4967287 firstname.lastname@example.org
LinksNational Tibetan Plateau Data Center